| MirGeneDB ID | Ovu-Mir-12499 |
|---|
| Family name |
MIR-12499 (all species) |
|---|
| Seed |
ACACCCG |
|---|
| Species |
Common octopus (Octopus vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Mir-12499
Npo-Mir-12499
Obi-Mir-12499
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01011115.1: 158-216 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAUCGACAGCAAACUCUAUGAUUGUUGCCGAACACCCGAGUGAGCGGCUGAGGAUUAAAAUACAUACCGAGCCCUUACGAGGGUGUUCGGCAACAGUUGACUAUCACAAGAUCUGUCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAUCGACAGCAAACUCUAU--| GA C GA AUUAAA
GAUUGUUGCCGAACACCC GUGAG GGCU GG \
UUGACAACGGCUUGUGGG CAUUC CCGA CC A
AGCUGUCUAGAACACUAUCAG^ AG - G- AUACAU
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Ovu-Mir-12499_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACACCCGAGUGAGCGGCUGAGGA -24
Get sequence
|
|---|
| Star sequence |
Ovu-Mir-12499_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CGAGCCCUUACGAGGGUGUUCG -59
Get sequence
|
|---|
