MirGeneDB ID | Esc-Mir-12532-v1 |
---|---|
Family name | MIR-12532 (all species) |
Seed | CCGCGAU |
Species | Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID | |
Paralogues | Esc-Mir-12532-v2 Esc-Mir-12532-v3 |
Orthologues | Obi-Mir-12532-v1 Ovu-Mir-12532-v1 |
Node of Origin (locus) | Coleoidea |
Node of Origin (family) | Coleoidea |
Genome context (GCA_004765925.1_miRNA_LOCI) |
|
Precursor (pre-Mir +30nt flank) | UACGAACAAGUGGCUGUCGGUUGAAUUUUUAAGACAUCCGCGAUCACUUGUUGUAUGGet precursor sequence |
Structure | 10 20 --| G GC U U AAUUU UAC AACAAGUG UG CGG UG \ AUG UUGUUCAC GC GCC AC U GU^ - UA - U AGAAU 50 40 30 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Esc-Mir-12532-v1_5p* |
mirBase accession | None |
Sequence |
0- UACGAACAAGUGGCUGUCGGUUG -23
Get sequence
|
Mature sequence | Esc-Mir-12532-v1_3p |
mirBase accession | None |
Sequence |
36- UCCGCGAUCACUUGUUGUAUG -57
Get sequence
|