| MirGeneDB ID | Obi-Mir-12532-v1 |
|---|
| Family name |
MIR-12532 (all species) |
|---|
| Seed |
CCGCGAU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Mir-12532-v2
Obi-Mir-12532-v3
|
|---|
| Orthologues |
Esc-Mir-12532-v1
Ovu-Mir-12532-v1
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ418194: 2425999-2426059 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUCCUUUUUUAUUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGCUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUUCCUUUUUUAUUUAUC U AG ---| G GC U U AAUUU
CA UGC UUGU UAUAC AACAAGUG UG CGG UG \
GU GCG AACG GUAUG UUGUUCAC GC GCC AC U
UUUCGGUCUGCUUUCAAG - CA GAA^ - UA - U ACACA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-12532-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UAUACGAACAAGUGGCUGUCGGUUG -25
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12532-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UCCGCGAUCACUUGUUGUAUGAA -61
Get sequence
|
|---|
