MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12532-v1

Family name MIR-12532 (all species)
Seed CCGCGAU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12532-v2  Obi-Mir-12532-v3 
Orthologues Esc-Mir-12532-v1  Ovu-Mir-12532-v1 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ418194: 2425999-2426059 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCCUUUUUUAUUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGCUUU
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Structure
        10        20        30           40        50        60 
CUUCCUUUUUUAUUUAUC  U   AG    ---|    G        GC  U   U  AAUUU 
                  CA UGC  UUGU   UAUAC AACAAGUG  UG CGG UG     \
                  GU GCG  AACG   GUAUG UUGUUCAC  GC GCC AC     U
UUUCGGUCUGCUUUCAAG  -   CA    GAA^    -        UA  -   U  ACACA 
 .       110        100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Obi-Mir-12532-v1_5p*

mirBase accessionNone
Sequence
0- UAUACGAACAAGUGGCUGUCGGUUG -25
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Mature sequence

Obi-Mir-12532-v1_3p

mirBase accessionNone
Sequence
38- UCCGCGAUCACUUGUUGUAUGAA -61
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