MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12532-v2

Family name MIR-12532 (all species)
Seed UCCGCGA
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12532-v1  Obi-Mir-12532-v3 
Orthologues Esc-Mir-12532-v2  Ovu-Mir-12532-v2 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ418194: 2426000-2426058 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCUUUUUUAUUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGCUU
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Structure
        10             20        30        40        50          
UUCCUUUUUUAUUUAUCCA-----|   AGUUG      G        GC  U   U  AAUUU 
                        UUGC     UUAUAC AACAAGUG  UG CGG UG     \
                        AACG     AGUAUG UUGUUCAC  GC GCC AC     U
UUCGGUCUGCUUUCAAGGUGCGCA^   GA---      -        UA  -   U  ACACA 
       110       100        90            80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Star sequence

Obi-Mir-12532-v2_5p*

mirBase accessionNone
Sequence
0- AUACGAACAAGUGGCUGUCGGUUGA -25
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Mature sequence

Obi-Mir-12532-v2_3p

mirBase accessionNone
Sequence
36- AUCCGCGAUCACUUGUUGUAUGA -59
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