MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12532-v3

Family name MIR-12532 (all species)
Seed AUCCGCG
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12532-v1  Obi-Mir-12532-v2 
Orthologues Esc-Mir-12532-v3  Ovu-Mir-12532-v3 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ418194: 2426001-2426057 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUUUUUUAUUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGCU
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Structure
        10             20        30        40        50         
UCCUUUUUUAUUUAUCCA-----|   AGUUG      G        GC  U   U  AAUUU 
                       UUGC     UUAUAC AACAAGUG  UG CGG UG     \
                       AACG     AGUAUG UUGUUCAC  GC GCC AC     U
UCGGUCUGCUUUCAAGGUGCGCA^   GA---      -        UA  -   U  ACACA 
     110       100        90            80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Star sequence

Obi-Mir-12532-v3_5p*

mirBase accessionNone
Sequence
0- UACGAACAAGUGGCUGUCGGUUGAA -25
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Mature sequence

Obi-Mir-12532-v3_3p

mirBase accessionNone
Sequence
34- CAUCCGCGAUCACUUGUUGUAUG -57
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