MirGeneDB ID | Esc-Mir-12532-v3 |
---|---|
Family name | MIR-12532 (all species) |
Seed | GUACGAA |
Species | Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID | |
Paralogues | Esc-Mir-12532-v1 Esc-Mir-12532-v2 |
Orthologues | Obi-Mir-12532-v3 Ovu-Mir-12532-v3 |
Node of Origin (locus) | Coleoidea |
Node of Origin (family) | Coleoidea |
Genome context (GCA_004765925.1_miRNA_LOCI) |
|
Precursor (pre-Mir +30nt flank) | UGUACGAACAAGUGGCUGUCGGUUGAAUUUUUAAGACAUCCGCGAUCACUUGUUGUAUGAAGet precursor sequence |
Structure | 10 20 30 U--| G GC U U AAUUU GUAC AACAAGUG UG CGG UG \ UAUG UUGUUCAC GC GCC AC U AAG^ - UA - U AGAAU 60 50 40 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Esc-Mir-12532-v3_5p |
mirBase accession | None |
Sequence |
0- UGUACGAACAAGUGGCUGUCGGU -23
Get sequence
|
Star sequence | Esc-Mir-12532-v3_3p* |
mirBase accession | None |
Sequence |
40- CGCGAUCACUUGUUGUAUGAA -61
Get sequence
|