MirGeneDB 3.0

MirGeneDB ID

Esc-Mir-12532-v3

Family name MIR-12532 (all species)
Seed GUACGAA
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-12532-v1  Esc-Mir-12532-v2 
Orthologues Obi-Mir-12532-v3  Ovu-Mir-12532-v3 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_004765925.1_miRNA_LOCI)
Precursor
(pre-Mir +30nt flank)
UGUACGAACAAGUGGCUGUCGGUUGAAUUUUUAAGACAUCCGCGAUCACUUGUUGUAUGAA
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Structure
          10        20        30 
U--|   G        GC  U   U  AAUUU 
   GUAC AACAAGUG  UG CGG UG     \
   UAUG UUGUUCAC  GC GCC AC     U
AAG^   -        UA  -   U  AGAAU 
60         50         40
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Esc-Mir-12532-v3_5p

mirBase accessionNone
Sequence
0- UGUACGAACAAGUGGCUGUCGGU -23
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Star sequence

Esc-Mir-12532-v3_3p*

mirBase accessionNone
Sequence
40- CGCGAUCACUUGUUGUAUGAA -61
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