MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1641

Family name MIR-1641 (all species)
Seed GAGGAUU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1641
Paralogues
Orthologues Ami-Mir-1641  Cli-Mir-1641  Tgu-Mir-1641 
Node of Origin (locus) Archosauria
Node of Origin (family) Archosauria
Genome context
(Gallus_gallus.GRCg6a)		 3: 13376040-13376098 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAUAAUAACUUCGAUGCAGGGCAUUUCCUGAGGAUUAAUGACUGUCUGGGGUCAUCAUCUCCUCCCAGUUAGUUAUUAAUCCCCAGGAAAUACUCUGUGCCUUGAUCAUUAUUGCUU
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Structure
        10          20        30        40        50         
GCAAUAAUAACUUCGAU--|     C        A             U     GUCAUC 
                   GCAGGG AUUUCCUG GGAUUAAUGACUG CUGGG      \
                   UGUCUC UAAAGGAC CCUAAUUAUUGAU GACCC      A
UUCGUUAUUACUAGUUCCG^     A        C             U     UCCUCU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1641_5p
mirBase accessionMIMAT0007516
Sequence 
0- UGAGGAUUAAUGACUGUCUGGG -22
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Proposed targets TargetScanVert: gga-miR-1641
miRDB: MIMAT0007516
Star sequence

Gga-Mir-1641_3p*
mirBase accessionNone
Sequence 
37- CAGUUAGUUAUUAAUCCCCAGG -59
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