MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1729

Family name MIR-1729 (all species)
Seed UCCCUUA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1729
Paralogues
Orthologues Cli-Mir-1729  Tgu-Mir-1729 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(Gallus_gallus.GRCg6a)		 15: 1058322-1058384 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCUCUCUGGUAGACAGGCCUGAUCCUGCAUCCCUUACUCACAUGAGUAGUCGUAUCUAUUUCAGUGGGACUACUCGGUGAGUAAGGAUAGCAGGAUUGGGACCACUACCUGUAACUCUGAA
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Structure
        10          20        30         40        50        60 
AGCCUCUCUGGUAGACA-  -  UG       -|   C        A         GUAUCUA 
                  GG CC  AUCCUGC AUCC UUACUCAC UGAGUAGUC       U
                  CC GG  UAGGACG UAGG AAUGAGUG GCUCAUCAG       U
AAGUCUCAAUGUCCAUCA  A  GU       A^   -        -         GGUGACU 
 120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1729_5p
mirBase accessionMIMAT0007629
Sequence 
0- AUCCCUUACUCACAUGAGUAGUC -23
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Proposed targets TargetScanVert: gga-miR-1729-5p
miRDB: MIMAT0007629
Star sequence

Gga-Mir-1729_3p*
mirBase accessionMIMAT0007630
Sequence 
41- CUACUCGGUGAGUAAGGAUAGC -63
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Proposed targets TargetScanVert: gga-miR-1729-3p
miRDB: MIMAT0007630