MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-430-o40

Family name MIR-430 (all species)
Seed CCAAUAC
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-430-o41  Gja-Mir-430-P3 
Orthologues Hsa-Mir-430-P40a  Hsa-Mir-430-P40b  Pab-Mir-430-P40a  Pab-Mir-430-P40b 
Node of Origin (locus) G. japonicus
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015175473.1: 127897-127959 [+]
Precursor
(pre-Mir +30nt flank)
GGAAGGCUUUCCUACCUCUGCCUGGACGCCACCAAUACGAUGGCACUGUCUUGUGUAUUAUGACCCUGAGAAAGUGCUUUCUUGUAUUGGCGUCGUCUUGGCCAGGUUUGUCUUCUGAGGGGG
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Structure
        10          20        30        40          50          
GGAAGGCUUUCCUACCU-  -   U     CCA         U--|     G   UGUGUAUU 
                  CU GCC GGACG   CCAAUACGA   GGCACU UCU        \
                  GA CGG UCUGC   GGUUAUGUU   UCGUGA AGA        A
GGGGGAGUCUUCUGUUUG  C   U     UGC         CUU^     A   GUCCCAGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Gja-Mir-430-o40_5p
mirBase accessionNone
Sequence 
0- ACCAAUACGAUGGCACUGUCU -21
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Co-mature sequence

Gja-Mir-430-o40_3p
mirBase accessionNone
Sequence 
40- AAAGUGCUUUCUUGUAUUGGCGU -63
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