| MirGeneDB ID | Hmi-Mir-29-o5b |
|---|
| Family name |
MIR-29 (all species) |
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| Seed |
AGCACCA |
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| Species |
Panther worm (Hofstenia miamia) |
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| MiRBase ID |
|
|---|
| Paralogues |
Hmi-Mir-29-o4
Hmi-Mir-29-o5a
|
|---|
| Orthologues |
Gsp-Mir-29
|
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| Node of Origin (locus) |
H. miamia
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(Hofstenia_miamia.HmiaM1.dna.nonchromosomal) |
SCFE01000053.1: 95171-95222 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UGUGAUUUAUCAUUUGAUUUAUUUAAGUAACCUGCUUAUAUUUGGUGUACAGAUUUUCUCUAGCACCAAGUAAAAGCGGUUUAUGUUGAAUUACCUCUAUAUGUAAGUUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUGAUUUAUCAUUUGAUUU- -| C A AC UU
AUUUAA GUAA CUGCUU UAUUUGGUGU AGA \
UAAGUU UAUU GGCGAA AUGAACCACG UCU U
UUUUUGAAUGUAUAUCUCCAU G^ U A A- CU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Hmi-Mir-29-o5b_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCUGCUUAUAUUUGGUGUACAGA -23
Get sequence
|
|---|
| Mature sequence |
Hmi-Mir-29-o5b_3p |
| mirBase accession | None |
|---|
| Sequence |
30- UAGCACCAAGUAAAAGCGGUUU -52
Get sequence
|
|---|
