MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-550-P1

Family name MIR-550 (all species)
Seed GUCUUAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-550a-1
Paralogues Hsa-Mir-550-P2a  Hsa-Mir-550-P2b 
Orthologues Cja-Mir-550  Mml-Mir-550-P1  Pab-Mir-550-P1 
Node of Origin (locus) Catarrhini
Node of Origin (family) Simiiformes
Genome context
(hg38)		 chr7: 30289815-30289876 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUAUUUUGAUGCUUUGCUGGCUGGUGCAGUGCCUGAGGGAGUAAGAGCCCUGUUGUUGUAAGAUAGUGUCUUACUCCCUCAGGCACAUCUCCAACAAGUCUCUUGCUCUCCUCCAAUUU
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Structure
        10          20        30        40         50          
CUGGUAUUUUGAUGCUUU--   GGC   UGCA                  -| CCUGUUGU 
                    GCU   UGG    GUGCCUGAGGGAGUAAGA GC        \
                    UGA   ACC    CACGGACUCCCUCAUUCU UG        U
UUUAACCUCCUCUCGUUCUC   ACA   UCUA                  G^ AUAGAAUG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-550-P1_5p*
mirBase accessionMIMAT0004800
Sequence 
0- AGUGCCUGAGGGAGUAAGAGCCC -23
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Proposed targets microrna.org: MIMAT0004800
TargetScanVert: hsa-miR-550a-5p
TargetMiner: hsa-miR-550a-5p
miRDB: MIMAT0004800
Mature sequence

Hsa-Mir-550-P1_3p
mirBase accessionMIMAT0003257
Sequence 
39- UGUCUUACUCCCUCAGGCACAUC -62
Get sequence
Proposed targets microrna.org: MIMAT0003257
TargetScanVert: hsa-miR-550a-3p
TargetMiner: hsa-miR-550a-3p
miRDB: MIMAT0003257