MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-552

Family name MIR-552 (all species)
Seed GUUUAAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-552
Paralogues
Orthologues Cja-Mir-552  Mml-Mir-552  Pab-Mir-552 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(hg38)
chr1: 34669613-34669671 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGUUUAACCAUUCAAAUAUACCACAGUUUGUUUAACCUUUUGCCUGUUGGUUGAAGAUGCCUUUCAACAGGUGACUGGUUAGACAAACUGUGGUAUAUACACAGGAUGGAAUACUAC
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Structure
        10          20        30        40        50         
UUUGUUUAACCAUUCAA--|                     UU UG        UUGAAG 
                   AUAUACCACAGUUUGUUUAACC  U  CCUGUUGG      \
                   UAUAUGGUGUCAAACAGAUUGG  A  GGACAACU      A
CAUCAUAAGGUAGGACACA^                     UC GU        UUCCGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-552_5p

mirBase accessionMIMAT0026615
Sequence
0- UGUUUAACCUUUUGCCUGUUGG -22
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Proposed targets TargetScanVert: hsa-miR-552-5p
miRDB: MIMAT0026615
Co-mature sequence

Hsa-Mir-552_3p

mirBase accessionMIMAT0003215
Sequence
37- AACAGGUGACUGGUUAGACAAA -59
Get sequence
Proposed targets microrna.org: MIMAT0003215
TargetScanVert: hsa-miR-552-3p
miRDB: MIMAT0003215