| MirGeneDB ID | Pab-Mir-552 |
|---|---|
| Family name | MIR-552 (all species) |
| Seed | GUUUAAC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-552 Hsa-Mir-552 Mml-Mir-552 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 198883175-198883233 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUGUUCAACCAUUCAAAUAUACCACAGUUUGUUUAACCUUUCGCGUGUUGGUUGAAGAUGCCUUUCAACAGGUGACUGGUUAGACAAACUGUGGUAUAUACACAGGAUGGAAUACUACGet precursor sequence |
| Structure | 10 20 30 40 50 UUUGUUCAACCAUUCAA--| UU G UUGAAG AUAUACCACAGUUUGUUUAACC UCGC UGUUGG \ UAUAUGGUGUCAAACAGAUUGG AGUG ACAACU A CAUCAUAAGGUAGGACACA^ UC G UUCCGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Pab-Mir-552_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUUUAACCUUUCGCGUGUUGG -22
Get sequence
|
| Co-mature sequence | Pab-Mir-552_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AACAGGUGACUGGUUAGACAAA -59
Get sequence
|
