MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-279-P17

Family name MIR-279 (all species)
Seed GACUAGA
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-279-P18 
Orthologues Agr-Mir-279  Bpl-Mir-279  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) L. anatina
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01000429: 180847-180903 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGACGAUAGUUUAUUUCACCCUACCAGGGAUGAUUGUGCGUCUAGUCCAUGUAGCUGUGACAUCAUGACUAGAUCCACACUCAUCCCUGUUGGGGAACGCCAAGAGCAGACGACAA
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Structure
        10          20        30        40        50        
CAGACGAUAGUUUAUUUCA--|    C         U    C        C   UAGCU 
                     CCCUA CAGGGAUGA UGUG GUCUAGUC AUG     G
                     GGGGU GUCCCUACU ACAC UAGAUCAG UAC     U
AACAGCAGACGAGAACCGCAA^    U         C    C        -   UACAG 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
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Star sequence

Lan-Mir-279-P17_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUGAUUGUGCGUCUAGUCCAUG -22
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Mature sequence

Lan-Mir-279-P17_3p
mirBase accessionNone
Sequence 
36- UGACUAGAUCCACACUCAUCC -57
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