| MirGeneDB ID | Mdo-Mir-12355 |
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| Family name |
MIR-12355 (all species) |
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| Seed |
CGGAGGU |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-12355
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-12355
Sha-Mir-12355
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
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Genome context
(monDom5_add) |
4: 380255120-380255178 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUUUCUAGGUAUGGCUUGGACAAGAUGGCUGCGGAGGUCCGUUUCCACUCUGAAGUUAUAUGAUUCAGAGCUGGAAUGGACCUCAGAGGUCAUCUAGUCCCAUCUCUUCAUUGCACAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUUCUAGGUAUGGCUU--| A GCG U - AAGUUA
GGAC AGAUGGCU GAGGUCCGUU CCA CUCUG \
CCUG UCUACUGG CUCCAGGUAA GGU GAGAC U
AGACACGUUACUUCUCUAC^ A AGA - C UUAGUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Mdo-Mir-12355_5p |
| mirBase accession | MIMAT0050264 |
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| Sequence |
0- GCGGAGGUCCGUUUCCACUCUG -22
Get sequence
|
|---|
| Star sequence |
Mdo-Mir-12355_3p* |
| mirBase accession | MIMAT0050265 |
|---|
| Sequence |
37- GAGCUGGAAUGGACCUCAGAGG -59
Get sequence
|
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