| MirGeneDB ID | Mdo-Mir-7288 |
|---|
| Family name |
MIR-7288 (all species) |
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| Seed |
CACCACG |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7288
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-7288
Sha-Mir-7288
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(monDom5_add) |
3: 465007920-465007979 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUGGAGCUACUAGAAUAGCUUGUUCCUGGCUGUUGGUACUGGCUGUGGUGGACCUGGAAUAGUAGAGGGUCACCACGCCCAAUAUCCAGUCAGUUGACAAGACUUAUCACUCCUUCCUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUGGAGCUACUAGAAUAG- C-| UU C C GA UGGAA
CUUGUU CUGGCUG GGUA UGG UGUGGUG CC U
GAACAG GACUGAC CUAU ACC GCACCAC GG A
UCUCCUUCCUCACUAUUCA UU^ -- A C UG AGAUG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7288_5p* |
| mirBase accession | MIMAT0028558 |
|---|
| Sequence |
0- UGUUGGUACUGGCUGUGGUGGACC -24
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7288-5p
|
|---|
| Mature sequence |
Mdo-Mir-7288_3p |
| mirBase accession | MIMAT0028559 |
|---|
| Sequence |
39- UCACCACGCCCAAUAUCCAGU -60
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7288-3p
|
|---|
