| MirGeneDB ID | Sha-Mir-7288 |
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| Family name |
MIR-7288 (all species) |
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| Seed |
GUUGGUA |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-7288
Neu-Mir-7288
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL841430.1: 195509-195568 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCGGAGGCCCUAGAACAGCUUGUUCCUGGCUGUUGGUACUGGCUGUGGUGGACCUGGAAUAUCAGAGGGUCACCACGCCCAAUAUCCAGUCAGUUGACAAGUCUUGACACUCUCCUCCUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCGGAGGCCCUAGAACA- C-| UU C C GA UGGAA
GCUUGUU CUGGCUG GGUA UGG UGUGGUG CC U
UGAACAG GACUGAC CUAU ACC GCACCAC GG A
UUCCUCCUCUCACAGUUC UU^ -- A C UG AGACU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7288_5p |
| mirBase accession | None |
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| Sequence |
0- UGUUGGUACUGGCUGUGGUGGACC -24
Get sequence
|
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| Star sequence |
Sha-Mir-7288_3p* |
| mirBase accession | None |
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| Sequence |
39- UCACCACGCCCAAUAUCCAGU -60
Get sequence
|
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