| MirGeneDB ID | Mdo-Mir-7318 |
|---|
| Family name |
MIR-7318 (all species) |
|---|
| Seed |
UGCGUAU |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7318
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-7318
Neu-Mir-7318-as
Sha-Mir-7318
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
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Genome context
(monDom5_add) |
5: 18615368-18615426 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUGUGCCUUUAUUACCAAUAGUACGCAUGCCCUCAGAUUUCUAUACGCAUUUGUAUUCUCUACAUGAAUGCGUAUAGAAAUCUGAGGCCAUGAGUAUUAUAAUUGCCCCUUUUCCUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGUGCCUUUAUUACCA--| G C GUAUUC
AUAGUAC CAUG CCUCAGAUUUCUAUACGCAUUU \
UAUUAUG GUAC GGAGUCUAAAGAUAUGCGUAAG U
AGGUCCUUUUCCCCGUUAA^ A C UACAUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7318_5p* |
| mirBase accession | MIMAT0028636 |
|---|
| Sequence |
0- CCUCAGAUUUCUAUACGCAUUU -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7318-5p
|
|---|
| Mature sequence |
Mdo-Mir-7318_3p |
| mirBase accession | MIMAT0028637 |
|---|
| Sequence |
37- AUGCGUAUAGAAAUCUGAGGCC -59
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7318-3p
|
|---|
