MirGeneDB 3.0

MirGeneDB ID

Sha-Mir-7318

Family name MIR-7318 (all species)
Seed UGCGUAU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-7318  Neu-Mir-7318  Neu-Mir-7318-as 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL864737.1: 3415300-3415358 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUGCUUUCAUUGUCAAUAGUACGCAUGCCCUCAGAUUUCUAUACGCAUUUGUAUUCUCUACAUGAAUGCGUAUAGAAAUCUGAGGCCAUGAGUAUUAUAAUUGCCCCUUUUCCUGGA
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Structure
        10          20        30        40        50         
AUGUGCUUUCAUUGUCA--|      G    C                      GUAUUC 
                   AUAGUAC CAUG CCUCAGAUUUCUAUACGCAUUU      \
                   UAUUAUG GUAC GGAGUCUAAAGAUAUGCGUAAG      U
AGGUCCUUUUCCCCGUUAA^      A    C                      UACAUC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7318_5p*

mirBase accessionNone
Sequence
0- CCUCAGAUUUCUAUACGCAUUU -22
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Mature sequence

Sha-Mir-7318_3p

mirBase accessionNone
Sequence
37- AUGCGUAUAGAAAUCUGAGGCC -59
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