MirGeneDB ID | Mml-Mir-589 |
Family name |
MIR-589 (all species) |
Seed |
GAGAACC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-589
|
Paralogues |
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Orthologues |
Hsa-Mir-589
|
Node of Origin (locus) |
Catarrhini
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Node of Origin (family) |
Catarrhini
|
Genome context (rheMac8_trace) |
chr3: 39544691-39544751 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CACAAACUCCAGCCUGUGCCCAGCAGCCCCUGAGAACCACGUCUGCUCUGAGCUGGGUACUGCCUGUUCAGAACAGACGCUGCUUCCCAGACGCUGCCAGCUGGCCCCGUUCCUCUGGAUU
Get precursor sequence
|
Structure | 10 20 30 40 50
CACAAACUCCAGCCUGU---| CCA CC A C - C UGGGU
GC GCAGC CUG GAA CA CGUCUG UCUGAGC A
CG CGUCG GAC CUU GU GCAGAC AGACUUG C
UUAGGUCUCCUUGCCCCGGU^ AC- CA C C C A UCCGU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-589_5p |
mirBase accession | MIMAT0006449 |
Sequence |
0- UGAGAACCACGUCUGCUCUGAGC -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-589
|
Star sequence |
Mml-Mir-589_3p* |
mirBase accession | None |
Sequence |
37- UCAGAACAGACGCUGCUUCCCAGA -61
Get sequence
|