| MirGeneDB ID | Mmr-Mir-3140 |
|---|
| Family name |
MIR-3140 (all species) |
|---|
| Seed |
CCUUUUG |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cja-Mir-3140
Hsa-Mir-3140
Mml-Mir-3140
Pab-Mir-3140
|
|---|
| Node of Origin (locus) |
Primates
|
|---|
| Node of Origin (family) |
Primates
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007674.1: 51402554-51402623 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAAAAUCUAGUAUUCGUGUACUCUUGAGGUACCUGAAUUCUCAAAAGCUUUAUGUGUUCUGAAGUUAAUUGAAAAUAAGACCUUUUGGGAAUUCAGGUAGUUCAGGAGUGACCUUUCUAAAAAACAGACC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAAAAUCUAGUAUUCGUG--| G C AUGUGUUCUGAA
UACUCUUGAG UACCUGAAUUCUCAAAAG UUU G
GUGAGGACUU AUGGACUUAAGGGUUUUC AGA U
CCAGACAAAAAAUCUUUCCA^ G C AUAAAAGUUAAU
. 120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mmr-Mir-3140_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACCUGAAUUCUCAAAAGCUUU -21
Get sequence
|
|---|
| Mature sequence |
Mmr-Mir-3140_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
49- ACCUUUUGGGAAUUCAGGUAG -70
Get sequence
|
|---|
