| MirGeneDB ID | Pab-Mir-3140 |
|---|---|
| Family name | MIR-3140 (all species) |
| Seed | GCUUUUG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-3140 Hsa-Mir-3140 Mml-Mir-3140 Mmr-Mir-3140 |
| Node of Origin (locus) | Primates |
| Node of Origin (family) | Primates |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 174362592-174362660 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGAAGCCUACCAUUUAUGUCCUCUUGAGGUACCUGAAUUACCAAAAGCUUUAUGUAUUCUGAAGUUAUUGAAAAUAAGAGCUUUUGGGAAUUCAGGUAGUUCAGGAGUGACUUUUCUAAAAAACAGACCGet precursor sequence |
| Structure | 10 20 30 40 50 60 GGAAGCCUACCAUUUAU- -| G A AUGUAUUCUGAA GUC CUCUUGAG UACCUGAAUU CCAAAAGCUUU \ CAG GAGGACUU AUGGACUUAA GGUUUUCGAGA G CCAGACAAAAAAUCUUUU U^ G G AUAAAAGUUAUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Star sequence | Pab-Mir-3140_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACCUGAAUUACCAAAAGCUUU -21
Get sequence
|
| Mature sequence | Pab-Mir-3140_3p (predicted) |
| mirBase accession | None |
| Sequence |
48- AGCUUUUGGGAAUUCAGGUAG -69
Get sequence
|
