MirGeneDB 3.0
MirGeneDB ID

Nag-Novel-1-P2

Family name NAG-NOVEL-1 (all species)
Seed AAGGAAU
Species Thorny-headed worm 1 (Neoechinorhynchus agilis)
MiRBase ID
Paralogues Nag-Novel-1-P1  Nag-Novel-1-P3  Nag-Novel-1-P4  Nag-Novel-1-P5  Nag-Novel-1-P6  Nag-Novel-1-P7 
Orthologues
Node of Origin (locus) N.agilis
Node of Origin (family) N.agilis
Genome context
(N_agilis_genome_min1000_bacfree)		 k149_9498: 479-538 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGGUCCUGAAUUUGUUUCCAAAUCAAUGAAAGGAAUUUAAGAACAAAUCGAUGAAACAAAGUAUCGAUUGGUCUUAAAAUUCCUUUCAUUGAUUCUGAAUUUGUUUCCAUAUCAAUGA
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Structure
        10          20        30         40        50         
AUUGGUCCUGAAUUUGU--   CA               -|      ACA     AUGAAA 
                   UUC  AAUCAAUGAAAGGAA UUUAAGA   AAUCG      C
                   AAG  UUAGUUACUUUCCUU AAAUUCU   UUAGC      A
AGUAACUAUACCUUUGUUU   UC               A^      GG-     UAUGAA 
.       110       100        90        80         70        60
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Nag-Novel-1-P2_5p
mirBase accessionNone
Sequence 
0- AAAGGAAUUUAAGAACAAAUCG -22
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Star sequence

Nag-Novel-1-P2_3p*
mirBase accessionNone
Sequence 
38- AUUGGUCUUAAAAUUCCUUUCA -60
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