| MirGeneDB ID | Nag-Novel-1-P2 |
|---|
| Family name |
NAG-NOVEL-1 (all species) |
|---|
| Seed |
AAGGAAU |
|---|
| Species |
Thorny-headed worm 1 (Neoechinorhynchus agilis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Nag-Novel-1-P1
Nag-Novel-1-P3
Nag-Novel-1-P4
Nag-Novel-1-P5
Nag-Novel-1-P6
Nag-Novel-1-P7
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
N.agilis
|
|---|
| Node of Origin (family) |
N.agilis
|
|---|
Genome context
(N_agilis_genome_min1000_bacfree) |
k149_9498: 479-538 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUGGUCCUGAAUUUGUUUCCAAAUCAAUGAAAGGAAUUUAAGAACAAAUCGAUGAAACAAAGUAUCGAUUGGUCUUAAAAUUCCUUUCAUUGAUUCUGAAUUUGUUUCCAUAUCAAUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGGUCCUGAAUUUGU-- CA -| ACA AUGAAA
UUC AAUCAAUGAAAGGAA UUUAAGA AAUCG C
AAG UUAGUUACUUUCCUU AAAUUCU UUAGC A
AGUAACUAUACCUUUGUUU UC A^ GG- UAUGAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Nag-Novel-1-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAAGGAAUUUAAGAACAAAUCG -22
Get sequence
|
|---|
| Star sequence |
Nag-Novel-1-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AUUGGUCUUAAAAUUCCUUUCA -60
Get sequence
|
|---|
