| MirGeneDB ID | Neu-Mir-12465 |
|---|
| Family name |
MIR-12465 (all species) |
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| Seed |
UCAACAC |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Mdo-Mir-12465
Sha-Mir-12465
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 313673643-313673702 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AAAUGGUGAUCAACUCAUGGAUGUUCUGGAAGGGGAACCAGGUGAUUGCGUGCCUAUUGAAGACAGCAUCAACACUUCUUGUUUCUCUCUCCAGAGCAUCGUUCAACAAACAAAAAUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUGGUGAUCAACUCAUG- - C--| A C CUAUU
GAUGUUCUGGA AGGGGAAC AGGUG UUG GUGC G
CUACGAGACCU UCUCUUUG UUCAC AAC UACG A
AUUUAAAAACAAACAACUUG C UUC^ - - ACAGA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| Comment | Although named mir-505 by miRBase this locus is neither similar in sequence nor syntenic with Mir-505 in eutherian mammals and thus is given a different name. |
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|---|
| Star sequence |
Neu-Mir-12465_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGGAACCAGGUGAUUGCGUGC -23
Get sequence
|
|---|
| Mature sequence |
Neu-Mir-12465_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AUCAACACUUCUUGUUUCUCUCU -60
Get sequence
|
|---|
