| MirGeneDB ID | Neu-Mir-430-P51 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-430-P1 Neu-Mir-430-P2 Neu-Mir-430-P3 Neu-Mir-430-P52-v1 Neu-Mir-430-P52-v2 |
| Orthologues | Mdo-Mir-430-P51 Sha-Mir-430-P51 |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 18382539-18382598 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAACUUGGAAAGAAGAAAUCAACUUGUUCCAUCCUUACUAAGGGCACUUUUCUGCAAGCUUUGAGGUCAAAGUGCUCCUAGUGAGGAAGAAACAGUUUGAGCUCAUCCUGCGGCUUGUGGGet precursor sequence |
| Structure | 10 20 30 40 50 AAACUUGGAAAGAAGAAA--| C CCA A UCUGCAAG UCAA UUGUU UCCUUACUA GGGCACUUU C AGUU GACAA AGGAGUGAU CUCGUGAAA U GGUGUUCGGCGUCCUACUCG^ U AGA C CUGGAGUU . 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | The precursor sequence is incomplete at the 3' end. The sequence is taken from the 3p mature read. |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Neu-Mir-430-P51_5p* |
| mirBase accession | None |
| Sequence |
0- AUCCUUACUAAGGGCACUUUUC -22
Get sequence
|
| Mature sequence | Neu-Mir-430-P51_3p |
| mirBase accession | None |
| Sequence |
38- AAAGUGCUCCUAGUGAGGAAGA -60
Get sequence
|
