| MirGeneDB ID | Neu-Mir-430-P51 |
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| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-430-P1
Neu-Mir-430-P2
Neu-Mir-430-P3
Neu-Mir-430-P52-v1
Neu-Mir-430-P52-v2
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| Orthologues |
Mdo-Mir-430-P51
Sha-Mir-430-P51
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 18382539-18382598 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAACUUGGAAAGAAGAAAUCAACUUGUUCCAUCCUUACUAAGGGCACUUUUCUGCAAGCUUUGAGGUCAAAGUGCUCCUAGUGAGGAAGAAACAGUUUGAGCUCAUCCUGCGGCUUGUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAACUUGGAAAGAAGAAA--| C CCA A UCUGCAAG
UCAA UUGUU UCCUUACUA GGGCACUUU C
AGUU GACAA AGGAGUGAU CUCGUGAAA U
GGUGUUCGGCGUCCUACUCG^ U AGA C CUGGAGUU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| Comment | The precursor sequence is incomplete at the 3' end. The sequence is taken from the 3p mature read. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Star sequence |
Neu-Mir-430-P51_5p* |
| mirBase accession | None |
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| Sequence |
0- AUCCUUACUAAGGGCACUUUUC -22
Get sequence
|
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| Mature sequence |
Neu-Mir-430-P51_3p |
| mirBase accession | None |
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| Sequence |
38- AAAGUGCUCCUAGUGAGGAAGA -60
Get sequence
|
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