MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-430-P1  Neu-Mir-430-P2  Neu-Mir-430-P51  Neu-Mir-430-P52-v1  Neu-Mir-430-P52-v2 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cja-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Eca-Mir-430-P3  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Laf-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmr-Mir-430-P3  Mmu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Pab-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051819.1: 117241765-117241825 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCAAAACUACCUUUCAAGACUCCCCACCACUUAAACGUGGAUUUACUUGCUUUGUUUCUAAAAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUGAGUCUUACUUUCCUAUUAUAUAAUU
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Structure
        10          20        30        40        50          
UUCCAAAACUACCUUUC--|      C   C    U         UU        UUGUUU 
                   AAGACUC CCA CACU AAACGUGGA  UACUUGCU      \
                   UUCUGAG GGU GUGA UUUGUACCU  GUGAAUGA      C
UUAAUAUAUUAUCCUUUCA^      U   A    U         UC        AAAAAU 
 .       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-430-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUUAAACGUGGAUUUACUUGCU -23
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Mature sequence

Neu-Mir-430-P3_3p (predicted)

mirBase accessionNone
Sequence
38- UAAGUGCUUCCAUGUUUUAGUGA -61
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