MirGeneDB 3.0

MirGeneDB ID

Sto-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-430-P1  Sto-Mir-430-P2  Sto-Mir-430-P4 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cja-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Eca-Mir-430-P3  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Laf-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmr-Mir-430-P3  Mmu-Mir-430-P3  Neu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Pab-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)
BFAA01002990.1: 217072-217132 [-]
Precursor
(pre-Mir +30nt flank)
GCAAAUUGGGAGGAAUAUCUGUGGCAAGAACUCCUAACAUGUAUGCACUUUCUGUUAUAUUUCUGAAGUAAGUGCUUUUAUGUUGGGAUUUCUCAACGCACAAUUUGCAUUGAGAAGCAAA
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Structure
        10          20        30        40        50          
GCAAAUUGGGAGGAAUAUC--|   GCA    C          UAU      U  GUUAUA 
                     UGUG   AGAA UCCUAACAUG   GCACUU CU      \
                     ACGC   UCUU AGGGUUGUAU   CGUGAA GA      U
AAACGAAGAGUUACGUUUAAC^   AAC    U          UUU      U  AGUCUU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Sto-Mir-430-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCCUAACAUGUAUGCACUUUCU -23
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Mature sequence

Sto-Mir-430-P3_3p

mirBase accessionNone
Sequence
38- UAAGUGCUUUUAUGUUGGGAUUU -61
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