Mir-430-P3

MirGeneDB ID

Eca-Mir-430-P3

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Horse (Equus caballus)

MiRBase ID

eca-mir-302a

Paralogues

Eca-Mir-430-P1 Eca-Mir-430-P2 Eca-Mir-430-P4 Eca-Mir-430-P5 Eca-Mir-430-P6 Eca-Mir-430-P7

Orthologues

Aca-Mir-430-P3 Ami-Mir-430-P3 Bta-Mir-430-P3 Cfa-Mir-430-P3 Cja-Mir-430-P3 Cli-Mir-430-P3 Cmi-Mir-430-P3 Cpi-Mir-430-P3 Cpo-Mir-430-P3 Dno-Mir-430-P3 Dre-Mir-430-o3a1 Dre-Mir-430-o3a2 Dre-Mir-430-o3a3 Dre-Mir-430-o3a4 Dre-Mir-430-o3a5 Dre-Mir-430-o3a6 Dre-Mir-430-o3a7 Dre-Mir-430-o3a8 Dre-Mir-430-o3a9 Dre-Mir-430-o3a10 Dre-Mir-430-o3a11 Dre-Mir-430-o3a12 Dre-Mir-430-o3a13 Dre-Mir-430-o3a14 Dre-Mir-430-o3a15 Dre-Mir-430-o3a16 Dre-Mir-430-o3b1 Dre-Mir-430-o3b2 Ete-Mir-430-P3 Gga-Mir-430-P3 Gja-Mir-430-P3 Hsa-Mir-430-P3 Laf-Mir-430-P3 Mdo-Mir-430-P3 Mml-Mir-430-P3 Mmr-Mir-430-P3 Mmu-Mir-430-P3 Neu-Mir-430-P3 Oan-Mir-430-P3 Ocu-Mir-430-P3 Pab-Mir-430-P3 Rno-Mir-430-P3 Sha-Mir-430-P3 Spt-Mir-430-P3 Sto-Mir-430-P3 Tgu-Mir-430-P3 Xla-Mir-430-P3a Xla-Mir-430-P3b Xtr-Mir-430-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_002863925.1_EquCab3.0)

CM009149.1: 114120752-114120812 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P3)

Mir-430-P1 CM009149.1: 114120447-114120508 [+] UCSC Ensembl
Mir-430-P2 CM009149.1: 114120580-114120639 [+] UCSC Ensembl
Mir-430-P3 CM009149.1: 114120752-114120812 [+] UCSC Ensembl
Mir-430-P4 CM009149.1: 114120912-114120972 [+] UCSC Ensembl
Mir-92-P2a CM009149.1: 114121041-114121100 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACAAGUUUUUCUAAGAUUGGGCUCCCCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAUAAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUAGGUCUUCCUUUUACAAGACUUCAAG

Get precursor sequence

Structure

        10          20        30        40        50          
ACAAGUUUUUCUAAGAUU--|    CC   C    U         U         UUGAAA 
                    GGGCU  CCA CACU AAACGUGGA GUACUUGCU      \
                    UCUGG  GGU GUGA UUUGUACCU CGUGAAUGA      C
GAACUUCAGAACAUUUUCCU^    AU   A    U         U         AAAUAU 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er

Star sequence

Eca-Mir-430-P3_5p*

mirBase accession

None

Sequence

0- ACUUAAACGUGGAUGUACUUGCU -23

Get sequence

Mature sequence

Eca-Mir-430-P3_3p

mirBase accession

MIMAT0012911

Sequence

38- UAAGUGCUUCCAUGUUUUAGUGA -61

Get sequence