MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-302a
Paralogues Cfa-Mir-430-P1  Cfa-Mir-430-P2  Cfa-Mir-430-P4  Cfa-Mir-430-P5d1  Cfa-Mir-430-P5d2  Cfa-Mir-430-P7d1  Cfa-Mir-430-P7d2 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cja-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Eca-Mir-430-P3  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Laf-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmr-Mir-430-P3  Mmu-Mir-430-P3  Neu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Pab-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr32: 32429212-32429272 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P3)		 Mir-92-P2a chr32: 32428908-32428967 [-] UCSC Ensembl
Mir-430-P4 chr32: 32429036-32429096 [-] UCSC Ensembl
Mir-430-P3 chr32: 32429212-32429272 [-] UCSC Ensembl
Mir-430-P2 chr32: 32429369-32429428 [-] UCSC Ensembl
Mir-430-P1 chr32: 32429504-32429565 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACGUUUUUCCAAGACUGGGCUCCCCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUCAAAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUAAGUCUUACUUUUACAUUUUAGAAGU
Get precursor sequence
Structure
        10          20        30        40        50          
UUACGUUUUUCCAAGACU--|    CC   C    U         U         UUGAAA 
                    GGGCU  CCA CACU AAACGUGGA GUACUUGCU      \
                    UCUGA  GGU GUGA UUUGUACCU CGUGAAUGA      C
UGAAGAUUUUACAUUUUCAU^    AU   A    U         U         AAAACU 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut possibly at +3 on the 5p arm but without accompaning 3p reads.
3' NTU No
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-430-P3_5p* (predicted)
mirBase accessionMIMAT0009855
Sequence 
0- ACUUAAACGUGGAUGUACUUGCU -23
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Proposed targets TargetScanVert: cfa-miR-302a
miRDB: MIMAT0009855
Mature sequence

Cfa-Mir-430-P3_3p
mirBase accessionNone
Sequence 
38- UAAGUGCUUCCAUGUUUUAGUGA -61
Get sequence