| MirGeneDB ID | Cfa-Mir-430-P5d2 |
|---|
| Family name |
MIR-430 (all species) |
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| Seed |
CUCAAAA |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
Cfa-Mir-430-P1
Cfa-Mir-430-P2
Cfa-Mir-430-P3
Cfa-Mir-430-P4
Cfa-Mir-430-P5d1
Cfa-Mir-430-P7d1
Cfa-Mir-430-P7d2
|
|---|
| Orthologues |
Bta-Mir-430-P5
Cja-Mir-430-P5
Cpo-Mir-430-P5
Dno-Mir-430-P5
Eca-Mir-430-P5
Ete-Mir-430-P5
Hsa-Mir-430-P5
Laf-Mir-430-P5
Mml-Mir-430-P5
Ocu-Mir-430-P5
Pab-Mir-430-P5
Xtr-Mir-430-o5d2
|
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| Node of Origin (locus) |
C. familiaris
|
|---|
| Node of Origin (family) |
Vertebrata
|
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Genome context
(canFam3_add) |
chr1: 103406620-103406679 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAUUUCACGUAGACCUUCUCAGCCGGGGACACUCAAAAAAUGGCGGCACUUUCCUACCUAGAACAGAAAGUGCCCCCACAGUUUGAGUGGCACAGGCCGAGUAUCCAGGAUCCGCCAGCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAUUUCACGUAGACCUU--| A GGGGA AAA C CUACC
CUC GCC CACUCAAA UGG GGCACUUUC U
GAG CGG GUGAGUUU ACC CCGUGAAAG A
GCGACCGCCUAGGACCUAU^ C ACACG GAC C ACAAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-430-P5d2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACUCAAAAAAUGGCGGCACUUUC -23
Get sequence
|
|---|
| Co-mature sequence |
Cfa-Mir-430-P5d2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAGUGCCCCCACAGUUUGAGUGG -60
Get sequence
|
|---|
