Mir-92-P2a

MirGeneDB ID

Cfa-Mir-92-P2a

Family name

MIR-92 (all species)

Seed

AUUGCAC

Species

Dog (Canis familiaris)

MiRBase ID

cfa-mir-367

Paralogues

Cfa-Mir-92-P1a Cfa-Mir-92-P1c Cfa-Mir-92-P1d Cfa-Mir-92-P2c Cfa-Mir-92-P2d

Orthologues

Aca-Mir-92-P2a Ami-Mir-92-P2a Asu-Mir-92 Bfl-Mir-92-o2 Bla-Mir-92-o2 Bta-Mir-92-P2a Cel-Mir-92 Cja-Mir-92-P2a Cli-Mir-92-P2a Cmi-Mir-92-P2a Cpi-Mir-92-P2a Cpo-Mir-92-P2a Dno-Mir-92-P2a Eca-Mir-92-P2a Esc-Mir-92 Ete-Mir-92-P2a Gga-Mir-92-P2a Gja-Mir-92-P2a Gsp-Mir-92 Hmi-Mir-92 Hsa-Mir-92-P2a Isc-Mir-92 Laf-Mir-92-P2a Mdo-Mir-92-P2a Mml-Mir-92-P2a Mmr-Mir-92-P2a Mmu-Mir-92-P2a Mun-Mir-92-P2a Neu-Mir-92-P2a Oan-Mir-92-P2a Obi-Mir-92 Ocu-Mir-92-P2a Pab-Mir-92-P2a Rno-Mir-92-P2a Sha-Mir-92-P2a Sme-Mir-92 Spt-Mir-92-P2a Sto-Mir-92-P2a Tgu-Mir-92-P2a Xla-Mir-92-P2a Xtr-Mir-92-P2a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(canFam3_add)

chr32: 32428908-32428967 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P2a)

Mir-92-P2a chr32: 32428908-32428967 [-] UCSC Ensembl
Mir-430-P4 chr32: 32429036-32429096 [-] UCSC Ensembl
Mir-430-P3 chr32: 32429212-32429272 [-] UCSC Ensembl
Mir-430-P2 chr32: 32429369-32429428 [-] UCSC Ensembl
Mir-430-P1 chr32: 32429504-32429565 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAUUUAUGCAGAUCUUGGCUACAUGCCAUGACUGUUGCUAAUAUGCAACUCUGUUCAAUACAAAUUGGAAUUGCACUUUAGCAAUGGUGAUGGAGGGUGUCCAUCUACACCAGAACUCUA

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Structure

        10          20        30        40        50         
AAUUUAUGCAGAUCUUGGC--|  AUG    G           UA     C   GUUCAA 
                     UAC   CCAU ACUGUUGCUAA  UGCAA UCU      U
                     GUG   GGUA UGGUAACGAUU  ACGUU AGG      A
AUCUCAAGACCACAUCUACCU^  GGA    G           UC     A   UUAAAC 
.       110       100        90        80        70        60

Deep sequencing

3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

An	An	An	Bl	Ce	Co	He	Hi	Hi	Hy	Ki	Ki	Li	Lu	Ov	Sk	Te	Te

Star sequence

Cfa-Mir-92-P2a_5p* (predicted)

mirBase accession

MIMAT0009859

Sequence

0- ACUGUUGCUAAUAUGCAACUCU -22

Get sequence

Proposed targets

TargetScanVert: cfa-miR-367
miRDB: MIMAT0009859

Mature sequence

Cfa-Mir-92-P2a_3p (predicted)

mirBase accession

None

Sequence

38- AAUUGCACUUUAGCAAUGGUGA -60

Get sequence