| MirGeneDB ID | Cja-Mir-92-P2a |
|---|---|
| Family name | MIR-92 (all species) |
| Seed | AUUGCAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-92-P1a Cja-Mir-92-P1c Cja-Mir-92-P1d Cja-Mir-92-P2c Cja-Mir-92-P2d |
| Orthologues | Aca-Mir-92-P2a Ami-Mir-92-P2a Asu-Mir-92 Bfl-Mir-92-o2 Bla-Mir-92-o2 Bta-Mir-92-P2a Cel-Mir-92 Cfa-Mir-92-P2a Cli-Mir-92-P2a Cmi-Mir-92-P2a Cpi-Mir-92-P2a Cpo-Mir-92-P2a Dno-Mir-92-P2a Eca-Mir-92-P2a Esc-Mir-92 Ete-Mir-92-P2a Gga-Mir-92-P2a Gja-Mir-92-P2a Gsp-Mir-92 Hmi-Mir-92 Hsa-Mir-92-P2a Isc-Mir-92 Laf-Mir-92-P2a Mdo-Mir-92-P2a Mml-Mir-92-P2a Mmr-Mir-92-P2a Mmu-Mir-92-P2a Mun-Mir-92-P2a Neu-Mir-92-P2a Oan-Mir-92-P2a Obi-Mir-92 Ocu-Mir-92-P2a Pab-Mir-92-P2a Rno-Mir-92-P2a Sha-Mir-92-P2a Sme-Mir-92 Spt-Mir-92-P2a Sto-Mir-92-P2a Tgu-Mir-92-P2a Xla-Mir-92-P2a Xtr-Mir-92-P2a |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021917.1: 80664486-80664544 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUGUGUGCAGUUCAUGGCUACAGGCCAUUACUGUUGCUAAUAUGCAACUCUGUUGAACAAAAUUGGAAUUGCACUUUAGCAAUGGUGAUGGAUUGUUAAGCCAACGACAACAGAAUUUGet precursor sequence |
| Structure | 10 20 30 40 50 UUUGUGUGCAGUUCAUGGCU--| G UA C GUUGAA ACAG CCAUUACUGUUGCUAA UGCAA UCU \ UGUU GGUAGUGGUAACGAUU ACGUU AGG C UUUAAGACAACAGCAACCGAAU^ A UC A UUAAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-92-P2a_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUGUUGCUAAUAUGCAACUCU -22
Get sequence
|
| Mature sequence | Cja-Mir-92-P2a_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AAUUGCACUUUAGCAAUGGUGA -59
Get sequence
|
