MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-92-P2a

Family name MIR-92 (all species)
Seed AUUGCAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-92-P1a  Laf-Mir-92-P1c  Laf-Mir-92-P1d  Laf-Mir-92-P2c  Laf-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cja-Mir-92-P2a  Cli-Mir-92-P2a  Cmi-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Dno-Mir-92-P2a  Eca-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2a  Isc-Mir-92  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mmr-Mir-92-P2a  Mmu-Mir-92-P2a  Mun-Mir-92-P2a  Neu-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Pab-Mir-92-P2a  Rno-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010041.1: 21847463-21847522 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCAUAUUACAUUGUGUGGCACAGGCCAUUACUGUUGCUAACAUGCAACUCUGCUGAAUAUACAUUGGAAUUGCACUUUAGCAAUGGUGAUGGAGUGUAUUUGUCAACUGUCAACAAGUA
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Structure
        10        20          30        40        50         
UCCAUAUUACAUUGUGUGGC--|  GG                CA     C   GCUGAA 
                      ACA  CCAUUACUGUUGCUAA  UGCAA UCU      U
                      UGU  GGUAGUGGUAACGAUU  ACGUU AGG      A
AUGAACAACUGUCAACUGUUUA^  GA                UC     A   UUACAU 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-92-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUGUUGCUAACAUGCAACUCU -22
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Mature sequence

Laf-Mir-92-P2a_3p (predicted)
mirBase accessionNone
Sequence 
38- AAUUGCACUUUAGCAAUGGUGA -60
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