MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-92-P2a

Family name MIR-92 (all species)
Seed AUUGCAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-92-P1a  Cmi-Mir-92-P1b  Cmi-Mir-92-P1c  Cmi-Mir-92-P1d  Cmi-Mir-92-P2b  Cmi-Mir-92-P2c  Cmi-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cja-Mir-92-P2a  Cli-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Dno-Mir-92-P2a  Eca-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2a  Isc-Mir-92  Laf-Mir-92-P2a  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mmr-Mir-92-P2a  Mmu-Mir-92-P2a  Mun-Mir-92-P2a  Neu-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Pab-Mir-92-P2a  Rno-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635904.1: 4108747-4108805 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCUUUCACCAUAGCACCUAUGGUGUACCACCACUGCGAUCGUGCAAUGCUGUUUCUCUGUUCUGGUAUUGCACUUCAGCAAUGGUGAUGCACUGUACAGUACCUUCAUUCUCCAAUG
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Structure
        10          20        30        40        50         
GUUCUUUCACCAUAGCACC--|        C     C   GAUC          GUUUCU 
                     UAUGGUGUA CACCA UGC    GUGCAAUGCU      \
                     AUGUCACGU GUGGU ACG    CACGUUAUGG      C
GUAACCUCUUACUUCCAUGAC^        A     A   ACUU          UCUUGU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-92-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCACUGCGAUCGUGCAAUGCU -22
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Mature sequence

Cmi-Mir-92-P2a_3p (predicted)
mirBase accessionNone
Sequence 
37- UAUUGCACUUCAGCAAUGGUGA -59
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