MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-92-P2d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-92-P1a  Cmi-Mir-92-P1b  Cmi-Mir-92-P1c  Cmi-Mir-92-P1d  Cmi-Mir-92-P2a  Cmi-Mir-92-P2b  Cmi-Mir-92-P2c 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2d  Cel-Mir-92  Cfa-Mir-92-P2d  Cja-Mir-92-P2d  Cpo-Mir-92-P2d  Dno-Mir-92-P2d  Dre-Mir-92-P2d  Eca-Mir-92-P2d  Esc-Mir-92  Ete-Mir-92-P2d  Gmo-Mir-92-P2d  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2d  Isc-Mir-92  Laf-Mir-92-P2d  Lch-Mir-92-P2d  Loc-Mir-92-P2d  Mal-Mir-92-P2d  Mdo-Mir-92-P2d  Mml-Mir-92-P2d  Mmr-Mir-92-P2d  Mmu-Mir-92-P2d  Oan-Mir-92-P2d  Obi-Mir-92  Ocu-Mir-92-P2d  Pab-Mir-92-P2d  Rno-Mir-92-P2d  Sha-Mir-92-P2d  Sme-Mir-92  Tni-Mir-92-P2d  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4  Xtr-Mir-92-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI637757.1: 5709-5768 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUAUUACGGUACCAAACGCCAGUGUUGAGAGGUGGAGACUUGGGCAAUUGCUGGGCUUCCAGGAGGGCAUUGCACUUGUCUCUGUCUGACAUUACUGGUGUGACGCUUCCUGGAAUCUA
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Structure
        10          20        30        40         50          
UGUAUUACGGUACCAAA--|       U  AG   UG     UU  -     U   GGGCUU 
                   CGCCAGUG UG  AGG  GAGAC  GG GCAAU GCU      \
                   GUGGUCAU AC  UCU  CUCUG  UC CGUUA CGG      C
AUCUAAGGUCCUUCGCAGU^       U  AG   GU     U-  A     -   GAGGAC 
.       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-92-P2d_5p*
mirBase accessionNone
Sequence 
0- AGGUGGAGACUUGGGCAAUUGCU -23
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Mature sequence

Cmi-Mir-92-P2d_3p
mirBase accessionNone
Sequence 
38- CAUUGCACUUGUCUCUGUCUGA -60
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