MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-92-P2d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-25
Paralogues Hsa-Mir-92-P1a  Hsa-Mir-92-P1c  Hsa-Mir-92-P1d  Hsa-Mir-92-P2a  Hsa-Mir-92-P2c 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2d  Cel-Mir-92  Cfa-Mir-92-P2d  Cmi-Mir-92-P2d  Cpo-Mir-92-P2d  Dno-Mir-92-P2d  Dre-Mir-92-P2d  Esc-Mir-92  Ete-Mir-92-P2d  Gmo-Mir-92-P2d  Isc-Mir-92  Lch-Mir-92-P2d  Loc-Mir-92-P2d  Mal-Mir-92-P2d  Mdo-Mir-92-P2d  Mml-Mir-92-P2d  Mmu-Mir-92-P2d  Oan-Mir-92-P2d  Obi-Mir-92  Ocu-Mir-92-P2d  Rno-Mir-92-P2d  Sha-Mir-92-P2d  Sme-Mir-92  Tni-Mir-92-P2d  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4  Xtr-Mir-92-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(hg38)
chr7: 100093571-100093630 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2d)
Mir-92-P2d chr7: 100093571-100093630 [-] UCSC Ensembl
Mir-17-P4d chr7: 100093776-100093837 [-] UCSC Ensembl
Mir-17-P1d chr7: 100094002-100094063 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUGAACUCCGGGACUGGCCAGUGUUGAGAGGCGGAGACUUGGGCAAUUGCUGGACGCUGCCCUGGGCAUUGCACUUGUCUCGGUCUGACAGUGCCGGCCCAACACUGCGGAUGCUGGG
Get precursor sequence
Structure
        10          20        30        40         50          
AGCUGAACUCCGGGACU--|   A UG   AG    G     UU  -     U   GGACGC 
                   GGCC G  UUG  AGGC GAGAC  GG GCAAU GCU      \
                   CCGG C  GAC  UCUG CUCUG  UC CGUUA CGG      U
GGGUCGUAGGCGUCACAAC^   C GU   AG    G     U-  A     -   GUCCCG 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-92-P2d_5p*

mirBase accessionMIMAT0004498
Sequence
0- AGGCGGAGACUUGGGCAAUUGCU -23
Get sequence
Proposed targets microrna.org: MIMAT0004498
TargetScanVert: hsa-miR-25-5p
TargetMiner: hsa-miR-25-5p
miRDB: MIMAT0004498
Mature sequence

Hsa-Mir-92-P2d_3p

mirBase accessionMIMAT0000081
Sequence
38- CAUUGCACUUGUCUCGGUCUGA -60
Get sequence
Proposed targets microrna.org: MIMAT0000081
TargetScanVert: hsa-miR-25-3p
TargetMiner: hsa-miR-25-3p
miRDB: MIMAT0000081