MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-92-P1c

Family name MIR-92 (all species)
Seed AUUGCAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-92a-2
Paralogues Hsa-Mir-92-P1a  Hsa-Mir-92-P1d  Hsa-Mir-92-P2a  Hsa-Mir-92-P2c  Hsa-Mir-92-P2d 
Orthologues Aca-Mir-92-P1c  Ami-Mir-92-P1c  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1c  Cel-Mir-92  Cfa-Mir-92-P1c  Cli-Mir-92-P1c  Cmi-Mir-92-P1c  Cpi-Mir-92-P1c  Cpo-Mir-92-P1c  Dno-Mir-92-P1c  Esc-Mir-92  Ete-Mir-92-P1c  Gga-Mir-92-P1c  Gja-Mir-92-P1c  Isc-Mir-92  Mdo-Mir-92-P1c  Mml-Mir-92-P1c  Mmu-Mir-92-P1c  Mun-Mir-92-P1c  Oan-Mir-92-P1c  Obi-Mir-92  Ocu-Mir-92-P1c  Pbv-Mir-92-P1c  Rno-Mir-92-P1c  Sha-Mir-92-P1c  Sme-Mir-92  Spt-Mir-92-P1c  Sto-Mir-92-P1c  Tgu-Mir-92-P1c  Xla-Mir-92-P1c3  Xla-Mir-92-P1c4  Xtr-Mir-92-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(hg38)
chrX: 134169544-134169604 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P1c)
Mir-92-P2c chrX: 134169382-134169446 [-] UCSC Ensembl
Mir-92-P1c chrX: 134169544-134169604 [-] UCSC Ensembl
Mir-19-P2c chrX: 134169683-134169748 [-] UCSC Ensembl
Mir-17-P4c chrX: 134169812-134169872 [-] UCSC Ensembl
Mir-17-P2c chrX: 134170042-134170106 [-] UCSC Ensembl
Mir-17-P1c chrX: 134170208-134170266 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCUCCAGCACUCAUGCCCAUUCAUCCCUGGGUGGGGAUUUGUUGCAUUACUUGUGUUCUAUAUAAAGUAUUGCACUUGUCCCGGCCUGUGGAAGAAAGGAGGAUUUUUAUCGUCUUCUU
Get precursor sequence
Structure
        10          20        30        40        50        60
UAUCUCCAGCACUCAUGC--| A   A   C     G     UU  U   U    UGUGUU 
                    CC UUC UCC UGGGU GGGAU  GU GCA UACU      C
                    GG AAG AGG GUCCG CCCUG  CA CGU AUGA      U
UUCUUCUGCUAUUUUUAGGA^ A   A   U     G     UU  -   U    AAUAUA 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-92-P1c_5p*

mirBase accessionMIMAT0004508
Sequence
0- GGGUGGGGAUUUGUUGCAUUACU -23
Get sequence
Proposed targets microrna.org: MIMAT0004508
TargetScanVert: hsa-miR-92a-2-5p
TargetMiner: hsa-miR-92a-2-5p
miRDB: MIMAT0004508
Mature sequence

Hsa-Mir-92-P1c_3p

mirBase accessionMIMAT0000092
Sequence
39- UAUUGCACUUGUCCCGGCCUGU -61
Get sequence
Proposed targets microrna.org: MIMAT0000092
TargetScanVert: hsa-miR-92a-3p
TargetMiner: hsa-miR-92a-3p
miRDB: MIMAT0000092