MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-92-P1c

Family name MIR-92 (all species)
Seed AUUGCAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-92-P1a  Laf-Mir-92-P1d  Laf-Mir-92-P2a  Laf-Mir-92-P2c  Laf-Mir-92-P2d 
Orthologues Aca-Mir-92-P1c  Ami-Mir-92-P1c  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1c  Cel-Mir-92  Cfa-Mir-92-P1c  Cja-Mir-92-P1c  Cli-Mir-92-P1c  Cmi-Mir-92-P1c  Cpi-Mir-92-P1c  Cpo-Mir-92-P1c  Dno-Mir-92-P1c  Eca-Mir-92-P1c  Esc-Mir-92  Ete-Mir-92-P1c  Gga-Mir-92-P1c  Gja-Mir-92-P1c  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1c  Isc-Mir-92  Mdo-Mir-92-P1c  Mml-Mir-92-P1c  Mmr-Mir-92-P1c  Mmu-Mir-92-P1c  Mun-Mir-92-P1c  Neu-Mir-92-P1c  Oan-Mir-92-P1c  Obi-Mir-92  Ocu-Mir-92-P1c  Pab-Mir-92-P1c  Pbv-Mir-92-P1c  Rno-Mir-92-P1c  Sha-Mir-92-P1c  Sme-Mir-92  Spt-Mir-92-P1c  Sto-Mir-92-P1c  Tgu-Mir-92-P1c  Xla-Mir-92-P1c3  Xla-Mir-92-P1c4  Xtr-Mir-92-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010127.1: 4183788-4183848 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUCUCCGGCGUUUCUGCUCGUUCAUCCAUGGGUGGGGAUUGAGUGCAUUGCUUGUGUUAUGUAUAAAGUAUUGCACUUGUCCCGGCCUAUGGAAGAAAGGAGGAUCUUAUCAUUGUCUUU
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Structure
        10         20         30        40        50        60
CGUCUCCGGCGUUUCUG-   G-|  A         G     U       U    UGUGUU 
                  CUC  UUC UCCAUGGGU GGGAU GAGUGCA UGCU      A
                  GAG  AAG AGGUAUCCG CCCUG UUCACGU AUGA      U
UUUCUGUUACUAUUCUAG   GA^  A         G     -       U    AAUAUG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-92-P1c_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGGUGGGGAUUGAGUGCAUUGCU -23
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Mature sequence

Laf-Mir-92-P1c_3p
mirBase accessionNone
Sequence 
39- UAUUGCACUUGUCCCGGCCUAU -61
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