| MirGeneDB ID | Cja-Mir-92-P1c |
|---|---|
| Family name | MIR-92 (all species) |
| Seed | AUUGCAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-92-P1a Cja-Mir-92-P1d Cja-Mir-92-P2a Cja-Mir-92-P2c Cja-Mir-92-P2d |
| Orthologues | Aca-Mir-92-P1c Ami-Mir-92-P1c Asu-Mir-92 Bfl-Mir-92-o1 Bla-Mir-92-o1 Bta-Mir-92-P1c Cel-Mir-92 Cfa-Mir-92-P1c Cli-Mir-92-P1c Cmi-Mir-92-P1c Cpi-Mir-92-P1c Cpo-Mir-92-P1c Dno-Mir-92-P1c Eca-Mir-92-P1c Esc-Mir-92 Ete-Mir-92-P1c Gga-Mir-92-P1c Gja-Mir-92-P1c Gsp-Mir-92 Hmi-Mir-92 Hsa-Mir-92-P1c Isc-Mir-92 Laf-Mir-92-P1c Mdo-Mir-92-P1c Mml-Mir-92-P1c Mmr-Mir-92-P1c Mmu-Mir-92-P1c Mun-Mir-92-P1c Neu-Mir-92-P1c Oan-Mir-92-P1c Obi-Mir-92 Ocu-Mir-92-P1c Pab-Mir-92-P1c Pbv-Mir-92-P1c Rno-Mir-92-P1c Sha-Mir-92-P1c Sme-Mir-92 Spt-Mir-92-P1c Sto-Mir-92-P1c Tgu-Mir-92-P1c Xla-Mir-92-P1c3 Xla-Mir-92-P1c4 Xtr-Mir-92-P1c |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 125646508-125646568 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUCUCCAGCACUCGUGCUCAUUCAUCCCUGGGUGGGGAUUUGUUGCAUUACUUGUGUUCUAUAUAAAGUAUUGCACUUGUCCCGGCCUGUGGAAGAAAGGAGGAUUUUAUCAUCUUCUUAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CAUCUCCAGCACUCGUG- A-| A C G UU U U UGUGUU CUC UUC UCC UGGGU GGGAU GU GCA UACU C GAG AAG AGG GUCCG CCCUG CA CGU AUGA U AUUCUUCUACUAUUUUAG GA^ A U G UU - U AAUAUA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UGUG in loop |
| Star sequence | Cja-Mir-92-P1c_5p* |
| mirBase accession | None |
| Sequence |
0- GGGUGGGGAUUUGUUGCAUUACU -23
Get sequence
|
| Mature sequence | Cja-Mir-92-P1c_3p |
| mirBase accession | None |
| Sequence |
39- UAUUGCACUUGUCCCGGCCUGU -61
Get sequence
|
