MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-302a
Paralogues Mdo-Mir-430-P1  Mdo-Mir-430-P2  Mdo-Mir-430-P4  Mdo-Mir-430-P51  Mdo-Mir-430-P52 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Mml-Mir-430-P3  Mmu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)
5: 66074652-66074712 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P3)
Mir-92-P2a 5: 66074340-66074399 [-] UCSC Ensembl
Mir-430-P4 5: 66074491-66074551 [-] UCSC Ensembl
Mir-430-P3 5: 66074652-66074712 [-] UCSC Ensembl
Mir-430-P2 5: 66074864-66074922 [-] UCSC Ensembl
Mir-430-P1 5: 66075012-66075070 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCGAAUCUUGUUUUCAGGACUCCCCACUACUUAAACGUGGAUUUACUUGCUUUGUUUCUAAAAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUGAGUCUUACUAUUCUUAUCAGAUGAC
Get precursor sequence
Structure
        10          20        30        40        50          
UUCCGAAUCUUGUUUUC--|      C   C    U         UU        UUGUUU 
                   AGGACUC CCA UACU AAACGUGGA  UACUUGCU      \
                   UUCUGAG GGU GUGA UUUGUACCU  GUGAAUGA      C
CAGUAGACUAUUCUUAUCA^      U   A    U         UC        AAAAAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-430-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUUAAACGUGGAUUUACUUGCU -23
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Mature sequence

Mdo-Mir-430-P3_3p (predicted)

mirBase accessionMIMAT0004182
Sequence
38- UAAGUGCUUCCAUGUUUUAGUGA -61
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Proposed targets TargetScanVert: mdo-miR-302a