MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-302c
Paralogues Mdo-Mir-430-P1  Mdo-Mir-430-P3  Mdo-Mir-430-P4  Mdo-Mir-430-P51  Mdo-Mir-430-P52 
Orthologues Ami-Mir-430-P2  Bta-Mir-430-P2  Cfa-Mir-430-P2  Cja-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Eca-Mir-430-P2  Ete-Mir-430-P2  Gga-Mir-430-P2  Hsa-Mir-430-P2  Laf-Mir-430-P2  Mml-Mir-430-P2  Mmr-Mir-430-P2  Mmu-Mir-430-P2  Neu-Mir-430-P2  Oan-Mir-430-P2  Ocu-Mir-430-P2  Pab-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2  Tgu-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)
5: 66074864-66074922 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P2)
Mir-92-P2a 5: 66074340-66074399 [-] UCSC Ensembl
Mir-430-P4 5: 66074491-66074551 [-] UCSC Ensembl
Mir-430-P3 5: 66074652-66074712 [-] UCSC Ensembl
Mir-430-P2 5: 66074864-66074922 [-] UCSC Ensembl
Mir-430-P1 5: 66075012-66075070 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUCGGACUUUUGGCAAGGAAUUCUCUCUGCUUUAACAUGGGGGUACCUGCUACGUAAUAAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGAGGAUUCCAAACUGGCACAGUUUUAACU
Get precursor sequence
Structure
        10          20        30        40        50         
AUGUCGGACUUUUGGCAA--|          UG  UU             C    ACGUA 
                    GGAAUUCUCUC  CU  AACAUGGGGGUAC UGCU     \
                    CCUUAGGAGAG  GA  UUGUACCUUCGUG AUGA     A
UCAAUUUUGACACGGUCAAA^          GU  CU             A    AAAAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-430-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUUUAACAUGGGGGUACCUGCU -23
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Mature sequence

Mdo-Mir-430-P2_3p (predicted)

mirBase accessionMIMAT0004181
Sequence
36- UAAGUGCUUCCAUGUUUCAGUGG -59
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Proposed targets TargetScanVert: mdo-miR-302c