MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues Oan-Mir-430-P1  Oan-Mir-430-P3  Oan-Mir-430-P4  Oan-Mir-430-P53  Oan-Mir-430-P54  Oan-Mir-430-P55  Oan-Mir-430-P56  Oan-Mir-430-P57  Oan-Mir-430-P58  Oan-Mir-430-P59  Oan-Mir-430-P60  Oan-Mir-430-P61 
Orthologues Ami-Mir-430-P2  Bta-Mir-430-P2  Cfa-Mir-430-P2  Cja-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Eca-Mir-430-P2  Ete-Mir-430-P2  Gga-Mir-430-P2  Hsa-Mir-430-P2  Laf-Mir-430-P2  Mdo-Mir-430-P2  Mml-Mir-430-P2  Mmr-Mir-430-P2  Mmu-Mir-430-P2  Neu-Mir-430-P2  Ocu-Mir-430-P2  Pab-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2  Tgu-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041739.1: 34493073-34493130 [+]
Clustered miRNAs
(< 50kb from Mir-430-P2)
Mir-430-P1 NC_041739.1: 34492840-34492898 [+]
Mir-430-P3 NC_041739.1: 34493236-34493293 [+]
Precursor
(pre-Mir +30nt flank)
CUGAUGUGGUCUUUGUGAAGAACUGCCUUUGCUUUAACAUGGGGGUACCUGCUACGUAAGAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGGUGACUCUUCAAAUCUACAACACUCAUC
Get precursor sequence
Structure
        10          20        30        40        50        
CUGAUGUGGUCUUUGUG--|   AC      UG  UU             C    ACGU 
                   AAGA  UGCCUU  CU  AACAUGGGGGUAC UGCU    A
                   UUCU  GUGGAG  GA  UUGUACCUUCGUG AUGA    A
CUACUCACAACAUCUAAAC^   CA      GU  CU             A    AAAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-430-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUUUAACAUGGGGGUACCUGCU -23
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Mature sequence

Oan-Mir-430-P2_3p

mirBase accessionNone
Sequence
35- UAAGUGCUUCCAUGUUUCAGUGG -58
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