MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-430-P1  Cja-Mir-430-P3  Cja-Mir-430-P4  Cja-Mir-430-P5  Cja-Mir-430-P6  Cja-Mir-430-P7  Cja-Mir-430-P8  Cja-Mir-430-P9  Cja-Mir-430-P10  Cja-Mir-430-P11 
Orthologues Ami-Mir-430-P2  Bta-Mir-430-P2  Cfa-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Eca-Mir-430-P2  Ete-Mir-430-P2  Gga-Mir-430-P2  Hsa-Mir-430-P2  Laf-Mir-430-P2  Mdo-Mir-430-P2  Mml-Mir-430-P2  Mmr-Mir-430-P2  Mmu-Mir-430-P2  Neu-Mir-430-P2  Oan-Mir-430-P2  Ocu-Mir-430-P2  Pab-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2  Tgu-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021917.1: 80663999-80664058 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUAUUAUAGAGGUUGAAGGGUUCCCCUUUGCUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGGUGUCUCCAAGCCAGCACACCCUUUGUU
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Structure
        10          20        30        40        50         
UCUAUUAUAGAGGUUGAA--|  UUCC    UG  UU             C    GUGUG 
                    GGG    CCUU  CU  AACAUGGGGGUAC UGCU     A
                    CCU    GGAG  GA  UUGUACCUUCGUG AUGA     A
UUGUUUCCCACACGACCGAA^  CUGU    GU  CU             A    AAACA 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Cja-Mir-430-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCUUUAACAUGGGGGUACCUGCU -23
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Mature sequence

Cja-Mir-430-P2_3p (predicted)
mirBase accessionNone
Sequence 
37- UAAGUGCUUCCAUGUUUCAGUGG -60
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