| MirGeneDB ID | Cja-Mir-430-P7 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P8 Cja-Mir-430-P9 Cja-Mir-430-P10 Cja-Mir-430-P11 |
| Orthologues | Bta-Mir-430-P7 Cfa-Mir-430-P7d1 Cfa-Mir-430-P7d2 Eca-Mir-430-P7 Hsa-Mir-430-P7 Laf-Mir-430-P7 Mml-Mir-430-P7 Mmr-Mir-430-P7 Mmu-Mir-430-P7a Mmu-Mir-430-P7b Mmu-Mir-430-P7c Pab-Mir-430-P7 Rno-Mir-430-P7a Rno-Mir-430-P7b Rno-Mir-430-P7c Xla-Mir-430-o7a Xla-Mir-430-o7b Xtr-Mir-430-o7 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45627844-45627904 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGUUCCCUUGUGAGCAGCUCAUGCUGGGAUCCCCAAAAUAGAGGCACUAUUCCUUUUGUCUGUACUGGGAAGUGCUUCGAUUUUGGGGAGCCCUGUGUGAGUAGGCAAUCAGGACCGAUCCGet precursor sequence |
| Structure | 10 20 30 40 50 GGUUCCCUUGUGAGCAG---| U A A A UUUUGU CUCAUGC GGG UCCCCAAAAU GAGGCACU UUCC \ GAGUGUG CCC AGGGGUUUUA CUUCGUGA AGGG C CCUAGCCAGGACUAACGGAU^ U G G - UCAUGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-430-P7_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCCCAAAAUAGAGGCACUAUUCC -23
Get sequence
|
| Mature sequence | Cja-Mir-430-P7_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- GAAGUGCUUCGAUUUUGGGGAGC -61
Get sequence
|
