| MirGeneDB ID | Cja-Mir-430-P11 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P7 Cja-Mir-430-P8 Cja-Mir-430-P9 Cja-Mir-430-P10 |
| Orthologues | Hsa-Mir-430-P11 Pab-Mir-430-P11 Sha-Mir-430-o11 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45466698-45466758 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCUGGAGCAAGACUAUCUCAUGCUGUGACCCUCAAGAUGGAAGCAAUUUCUGUUGUCUGAAAGGAAGGAAAGUGCUUUCUUUUUGAGAGUUACUGUUUGGGAAAAGCAACCUUGAUGCUGGet precursor sequence |
| Structure | 10 20 30 40 50 UGCUGGAGCAAGACUAU--| U U C U A GUUGUCU CUCA GC GUGAC CUCAAGA GGAAGCA UUUCU \ GGGU UG CAUUG GAGUUUU CUUUCGU AAAGG G GUCGUAGUUCCAACGAAAA^ U U A U G AAGGAAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-430-P11_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUCAAGAUGGAAGCAAUUUCU -22
Get sequence
|
| Mature sequence | Cja-Mir-430-P11_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- AAAGUGCUUUCUUUUUGAGAGU -61
Get sequence
|
