MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-430-P9

Family name MIR-430 (all species)
Seed CAAAACU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-430-P1  Cja-Mir-430-P2  Cja-Mir-430-P3  Cja-Mir-430-P4  Cja-Mir-430-P5  Cja-Mir-430-P6  Cja-Mir-430-P7  Cja-Mir-430-P8  Cja-Mir-430-P10  Cja-Mir-430-P11 
Orthologues Hsa-Mir-430-P9  Mml-Mir-430-P9  Pab-Mir-430-P9a  Pab-Mir-430-P9b  Xla-Mir-430-o9 
Node of Origin (locus) Simiiformes
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021936.1: 45464331-45464387 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCUGGAUGUGCCAUUCACGCUGAGGUCCUCAAAACUGAGGGGCAUUUUCUGUGGUCUAAAAGGAAAAUGCACCCCAGUUUUGUGGUUCUCAAUUGUGAAUACUCAACCAAACUCC
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Structure
        10         20         30        40         50        
AAGCUGGAUGUGCCAUU-    C-|   GU  U        A   -         GUGGU 
                  CACG  UGAG  CC CAAAACUG GGG GCAUUUUCU     \
                  GUGU  ACUC  GG GUUUUGAC CCC CGUAAAAGG     C
CCUCAAACCAACUCAUAA    UA^   UU  U        -   A         AAAAU 
     110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Cja-Mir-430-P9_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAAAACUGAGGGGCAUUUUCU -22
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Star sequence

Cja-Mir-430-P9_3p* (predicted)
mirBase accessionNone
Sequence 
35- AAAAUGCACCCCAGUUUUGUGG -57
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