| MirGeneDB ID | Cja-Mir-430-P9 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | CAAAACU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P7 Cja-Mir-430-P8 Cja-Mir-430-P10 Cja-Mir-430-P11 |
| Orthologues | Hsa-Mir-430-P9 Mml-Mir-430-P9 Pab-Mir-430-P9a Pab-Mir-430-P9b Xla-Mir-430-o9 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45464331-45464387 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGCUGGAUGUGCCAUUCACGCUGAGGUCCUCAAAACUGAGGGGCAUUUUCUGUGGUCUAAAAGGAAAAUGCACCCCAGUUUUGUGGUUCUCAAUUGUGAAUACUCAACCAAACUCCGet precursor sequence |
| Structure | 10 20 30 40 50 AAGCUGGAUGUGCCAUU- C-| GU U A - GUGGU CACG UGAG CC CAAAACUG GGG GCAUUUUCU \ GUGU ACUC GG GUUUUGAC CCC CGUAAAAGG C CCUCAAACCAACUCAUAA UA^ UU U - A AAAAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Cja-Mir-430-P9_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAAAACUGAGGGGCAUUUUCU -22
Get sequence
|
| Star sequence | Cja-Mir-430-P9_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- AAAAUGCACCCCAGUUUUGUGG -57
Get sequence
|
