| MirGeneDB ID | Cja-Mir-430-P4 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P7 Cja-Mir-430-P8 Cja-Mir-430-P9 Cja-Mir-430-P10 Cja-Mir-430-P11 |
| Orthologues | Ami-Mir-430-P4 Bta-Mir-430-P4 Cfa-Mir-430-P4 Cli-Mir-430-P4 Cmi-Mir-430-P4 Cpi-Mir-430-P4 Cpo-Mir-430-P4 Dno-Mir-430-P4 Eca-Mir-430-P4 Ete-Mir-430-P4 Gga-Mir-430-P4 Hsa-Mir-430-P4 Laf-Mir-430-P4 Mdo-Mir-430-P4 Mml-Mir-430-P4 Mmr-Mir-430-P4 Mmu-Mir-430-P4 Oan-Mir-430-P4 Ocu-Mir-430-P4 Pab-Mir-430-P4 Rno-Mir-430-P4 Spt-Mir-430-P4 Sto-Mir-430-P4 Tgu-Mir-430-P4 Xla-Mir-430-o4a Xla-Mir-430-o4b Xtr-Mir-430-o4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021917.1: 80664356-80664416 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAUUUUAAAGUCUGUUCAGGAACCCCCUCUACUUUAACAUGGAGGCACUUGCUGAGACAUGACAAAAAUAAGUGCUUCCAUGUUUGAGUGUGGUGGUUCCUACUUAAUCAGCAAUUGUGUUGet precursor sequence |
| Structure | 10 20 30 40 50 UAUUUUAAAGUCUGUUC---| C UC U CUGAGACA AGGAACC CC UACUU AACAUGGAGGCACUUG \ UCCUUGG GG GUGAG UUGUACCUUCGUGAAU U UUGUGUUAACGACUAAUUCA^ U U- U AAAAACAG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-430-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUUUAACAUGGAGGCACUUGCU -23
Get sequence
|
| Mature sequence | Cja-Mir-430-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UAAGUGCUUCCAUGUUUGAGUGU -61
Get sequence
|
