MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-430-P4

Family name MIR-430 (all species)
Seed AAGUGCU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-302d
Paralogues Cpo-Mir-430-o28  Cpo-Mir-430-P1  Cpo-Mir-430-P2  Cpo-Mir-430-P3  Cpo-Mir-430-P5 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Dno-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_43: 11471856-11471915 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-430-P4)		 Mir-92-P2a scaffold_43: 11471746-11471805 [-] UCSC
Mir-430-P4 scaffold_43: 11471856-11471915 [-] UCSC
Mir-430-P3 scaffold_43: 11471975-11472035 [-] UCSC
Mir-430-P2 scaffold_43: 11472099-11472157 [-] UCSC
Mir-430-P1 scaffold_43: 11472221-11472282 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGCGGCCGGGGCGCACUUCCGGGCCCCCCCACUCCGACAUGGGGCACUUGCUGCGGCGUGACUCAAAUAAGUGCUUCCAUGUUUGAGCGCGGUGGCCCCGGCGGCUUCGGAGGGGACCAC
Get precursor sequence
Structure
        10         20         30        40         50         
GGCGGCCGGGGCGCACUU-     C  -  CCA   C       -|       CUGCGGCG 
                   CCGGG CC CC   CUC GACAUGG GGCACUUG        \
                   GGCCC GG GG   GAG UUGUACC UCGUGAAU        U
CACCAGGGGAGGCUUCGGC     C  U  CGC   U       U^       AAACUCAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Cpo-Mir-430-P4_5p* (predicted)
mirBase accessionMIMAT0047152
Sequence 
0- ACUCCGACAUGGGGCACUUGCU -22
Get sequence
Mature sequence

Cpo-Mir-430-P4_3p (predicted)
mirBase accessionMIMAT0047153
Sequence 
37- UAAGUGCUUCCAUGUUUGAGCGC -60
Get sequence