MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-o4b

Family name MIR-430 (all species)
Seed CUGAAAA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cja-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Dno-Mir-430-P4  Eca-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Laf-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmr-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Pab-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xtr-Mir-430-o4 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030725.1: 56776920-56776977 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUGUGUUUAGAGAAAAGGAGCCACUUCUGCUGAAAACAUGGGGCACAUGCUAAUAAGAGAGUAGUAAGUGCUUUAUGUUUUAGCAGAUAUGACUUCUCAUUAUGUUCCCAACUUAU
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Structure
        10          20        30        40        50         
GUUUGUGUUUAGAGAAA--|    C  CU          A          A    AAUAA 
                   AGGAG CA  UCUGCUGAAA CAUGGGGCAC UGCU     \
                   UCUUC GU  AGACGAUUUU GUAUUUCGUG AUGA     G
UAUUCAACCCUUGUAUUAC^    A  AU          -          A    UGAGA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-430-o4b_5p
mirBase accessionNone
Sequence 
0- GCUGAAAACAUGGGGCACAUGCU -23
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Star sequence

Xla-Mir-430-o4b_3p*
mirBase accessionNone
Sequence 
36- UAAGUGCUUUAUGUUUUAGCAG -58
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