MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-430-o5q1

Family name MIR-430 (all species)
Seed AAGUGCU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Bta-Mir-430-P5  Cpo-Mir-430-P5  Dno-Mir-430-P5  Ete-Mir-430-P5  Hsa-Mir-430-P5  Mml-Mir-430-P5  Ocu-Mir-430-P5 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030724.1: 217936855-217936921 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGAAGAUUUCUACUUGCUGAUUAUGCAUCACCCAGAACAAGGCUCUCUUCUUUUGACCUUCAGGGAUGGUGAGAAAGUGCUUUCUGUUUUGGGUGAUCUAUGUAUCAGAAAUACAUCAAAGGUUUU
Get precursor sequence
Structure
        10         20         30        40          50        60  
AUGAAGAUUUCUACUUG-     -    C             --|   U  C    UUUGACCUU 
                  CUGAU UAUG AUCACCCAGAACA  AGGC CU UUCU         C
                  GACUA GUAU UAGUGGGUUUUGU  UUCG GA AAGA         A
UUUUGGAAACUACAUAAA     U    C             CU^   U  -    GUGGUAGGG 
     120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg He Re St St St St
Star sequence

Xla-Mir-430-o5q1_5p*
mirBase accessionNone
Sequence 
0- ACCCAGAACAAGGCUCUCUUCU -22
Get sequence
Mature sequence

Xla-Mir-430-o5q1_3p
mirBase accessionNone
Sequence 
44- AAAGUGCUUUCUGUUUUGGGUGA -67
Get sequence